I use Alea Tools as well. Red, Orange, Yellow, Green, Blue, and Purple are 'Player/Monster Colors', used for marking and curses and such; They are the darkest versions of those colors available, too. The reds used for players have notches in the sides so you can tell them apart from bloodied, but it isn't really a big deal if we're using flip-tokens, like in DDE.
The remaining colors are used as thus;
Red = Bloodied
Light Green = Deafened
Green = Blinded
Light Purple = Dominated
Light Blue = Prone
Blue = Restrained
Light Brown = Slowed
Brown = Immobilized
Dark Brown = Petrified
White = Weakened
Light Gray = Dazed
Dark Gray = Stunned
Black = Unconcious
Also, the colors are VERY easily differentiated.