The website seems to handle notifications fine for me but the mobile app just does whatever it wants. It doesn't usually show the app badge icon on my phone's home screen unless I really have something, but within the app it pretty much always does. It shows I have PMs that I can't see (and don't really think exist), and often just randomly notifies me of thread updates that've I long since seen as if they were new. It's annoyingly as hell, but out of necessity I've learned to tune it out.
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