I think Caverns of Thracia would be perfect for what you are looking for. It is deep and expansive, has an integral lore with ancient mysteries, and multiple competing factions. I haven't yet had a chance to run it, but it is at the top of my "desperately want to run" list.
Of the ones you listed, the Tomb of Abysthor probably fits better into the idea of one single dungeon that the party can return to over and over. It also has a long backstory and some really interesting mysteries. The Vault of Larin Karr is more of a campaign set in a wide valley. Tsojcanth and ToH are smaller, and I don't have any experience with Barakus or the others.
Of the ones you listed, the Tomb of Abysthor probably fits better into the idea of one single dungeon that the party can return to over and over. It also has a long backstory and some really interesting mysteries. The Vault of Larin Karr is more of a campaign set in a wide valley. Tsojcanth and ToH are smaller, and I don't have any experience with Barakus or the others.