Tony Vargas
Legend
Ah, not familiar with 3e but good to know.
From the 3.0 SRD:
Spot (WIS)
The Spot skill is used primarily to detect characters or creatures who are hiding. Typically, Spot is opposed by the Hide check of the creature trying not to be seen. Sometimes a creature isn't intentionally hiding but is still difficult to see, so a successful Spot check is necessary to notice it.
(Yeah, it was sense-specific, listen was a separate WIS skill.)
Search (INT)
The character generally must be within 10 feet of the object or surface to be searched. It takes 1 round to search a 5-foot-by-5-foot area or a volume of goods 5 feet on a side; doing so is a full-round action.
Search Checks (from a table it was too much trouble to try to cut/paste) : Ransack a chest full of junk to find a certain item, Notice a typical secret door or a simple trap, etc..
(Search was also used to find tracks (Tracking was a feat, though), and it's use to find traps was gated by a Rogue special ability...
...because niche protection was still kinda a thing.)
But, yeah. WIS based skill to see hiding/hard-to-see creatures, INT based to search for things.